Information for Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer (Motif 72)


Reverse Opposite:

p-value:0.000e+00
log p-value:-5.347e+03
Information Content per bp:1.691
Total Number of Sequences:50000.0
Total Number of Target Sequences:10171.0
Total Instances of Motif:10002.1
Total Instances of Motif in Targets:6507.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CNTGTTTACATA
CNTGTTTACATA

MA0148.3_FOXA1/Jaspar

Match Rank:2
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--CNTGTTTACATA-
TCCATGTTTACTTTG

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:CNTGTTTACATA
--TGTTTACTTT

MA0047.2_Foxa2/Jaspar

Match Rank:4
Score:0.96
Offset:2
Orientation:forward strand
Alignment:CNTGTTTACATA--
--TGTTTACTTAGG

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:CNTGTTTACATA
--TGTTTACTTT

MA0546.1_PHA-4/Jaspar

Match Rank:6
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:CNTGTTTACATA
--TGTTTACTTT

MA0593.1_FOXP2/Jaspar

Match Rank:7
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CNTGTTTACATA
TNTGTTTACTT-

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CNTGTTTACATA
NYYTGTTTACHN-

MA0480.1_Foxo1/Jaspar

Match Rank:9
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-CNTGTTTACATA
TCCTGTTTACA--

MA0297.1_FKH2/Jaspar

Match Rank:10
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:CNTGTTTACATA
--TGTTTAC---