Information for Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer (Motif 207)


Reverse Opposite:

p-value:0.000e+00
log p-value:-8.049e+03
Information Content per bp:1.706
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCWTTGTY
CCWTTGTY

MA0143.3_Sox2/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CCWTTGTY
CCTTTGTT

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CCWTTGTY-
NCCATTGTTC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CCWTTGTY--
CCATTGTTNY

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CCWTTGTY--
CCATTGTTTT

MA0514.1_Sox3/Jaspar

Match Rank:6
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CCWTTGTY--
CCTTTGTTTT

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.91
Offset:1
Orientation:forward strand
Alignment:CCWTTGTY
-CTTTGT-

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----CCWTTGTY-----
NNNTCCTTTGTTCTNNN

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----CCWTTGTY-----
TNNTCCTTTGTTCTNNT

MA0445.1_D/Jaspar

Match Rank:10
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CCWTTGTY--
TCCATTGTTCT