Information for Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer (Motif 221)


Reverse Opposite:

p-value:0.000e+00
log p-value:-8.218e+02
Information Content per bp:1.638
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:YTAATYNRATTA
YTAATYNRATTA

Phox2b/MA0681.1/Jaspar

Match Rank:2
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:YTAATYNRATTA
-TAATTAAATTA

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:YTAATYNRATTA
-TAATTAAATTA

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:YTAATYNRATTA
-TAATTAAATTA

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:YTAATYNRATTA-
-TAATCHGATTAC

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:YTAATYNRATTA
NAAATTSAATTT

DUX4/MA0468.1/Jaspar

Match Rank:7
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:YTAATYNRATTA
-TGATTAAATTA

prd/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.77
Offset:1
Orientation:forward strand
Alignment:YTAATYNRATTA
-TAATTGATTA-

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:YTAATYNRATTA-
NTGATTAAATTAN

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:YTAATYNRATTA
YTAATTAVHT--